PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast09G119300.3.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family NAC
Protein Properties Length: 335aa    MW: 37455.1 Da    PI: 5.2868
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast09G119300.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM94.32e-29351791128
                 NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee...vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.... 77 
                         lp+G++F+P+d el+ ++L++kv + +      ++  +   +i++  +i++++P++Lp  +k + ++ yfF++ +++y  gkrk r+    
  Brast09G119300.3.p  35 LPAGVKFDPSDLELL-RHLEAKVGEANpashilID--DfipTIEKEeGICYTHPENLP-DIKIDGTNNYFFHTISNAYLVGKRKCRKisns 121
                         799************.99*****999966664422..23333555548**********.7778999********************75666 PP

                 NAM  78 .....tksgyWkatgkdkevlskkgelvglkktLvfykgrapkg...ektdWvmheyrl 128
                               +s  W++tg++k++l+ +g ++g kk+Lv+y g++++g   ekt+W+mh+y+l
  Brast09G119300.3.p 122 ghtapDESIKWHKTGRSKSILE-NGVVKGWKKILVLYIGSKKRGgniEKTNWTMHQYHL 179
                         6655444677************.99************66555552227*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.22E-3127198IPR003441NAC domain
PROSITE profilePS5100526.79835198IPR003441NAC domain
PfamPF023653.0E-1336179IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MPPYEIKELV AKAWRECPNC KCCIYNDVSS LWPGLPAGVK FDPSDLELLR HLEAKVGEAN  60
PASHILIDDF IPTIEKEEGI CYTHPENLPD IKIDGTNNYF FHTISNAYLV GKRKCRKISN  120
SGHTAPDESI KWHKTGRSKS ILENGVVKGW KKILVLYIGS KKRGGNIEKT NWTMHQYHLG  180
VEEDEKHGKH VVSKIFLQLR SNKTGKSQTD AVNEEYDSFA GEIDPTTPMT NPPQPRRLDS  240
SLFKTEQYQE EDEEYEAALA ALLGLDEHPM SNGIPYDACP KKAPLPLDMD ALHEFSDPDV  300
GTLGQDKDKP SGLQDSFGSW LNLNESNVAS EQGF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003581357.21e-161PREDICTED: NAC domain-containing protein 8-like
SwissprotQ6NQK22e-66NAC8_ARATH; NAC domain-containing protein 8
TrEMBLI1IYV31e-161I1IYV3_BRADI; Uncharacterized protein
STRINGBRADI5G13450.11e-161(Brachypodium distachyon)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.14e-67NAC family protein